If you eat glow in the dark food, would the subsequent stool also glow?

no, you've broken the food down to it's lesser parts by then

I made some e.coli glow in the dark the other day in class tho... by forcing horizontal gene transfer via phages, I guess it could happen in your gut but you'd never know it
 
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Back in the 70's, my little brother and I ate some Boo-Berry(me), and Franken-Berry(him), cereal. It turned my shit florescent blue, and his pink, for two days. I don't know what type of dye they used back then, but it was potent stuff.
 
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